US20130324709A1 - Process for the preparation of 2-deoxy-2-fluoro-2-methyl-d-ribofuranosyl nucleoside compounds - Google Patents
Process for the preparation of 2-deoxy-2-fluoro-2-methyl-d-ribofuranosyl nucleoside compounds Download PDFInfo
- Publication number
- US20130324709A1 US20130324709A1 US13/903,726 US201313903726A US2013324709A1 US 20130324709 A1 US20130324709 A1 US 20130324709A1 US 201313903726 A US201313903726 A US 201313903726A US 2013324709 A1 US2013324709 A1 US 2013324709A1
- Authority
- US
- United States
- Prior art keywords
- deoxy
- fluoro
- process according
- methyl
- formula
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Abandoned
Links
- 238000000034 method Methods 0.000 title claims abstract description 29
- 230000008569 process Effects 0.000 title claims abstract description 26
- 238000002360 preparation method Methods 0.000 title claims abstract description 10
- -1 2-deoxy-2-fluoro-2-methyl-d-ribofuranosyl nucleoside compounds Chemical class 0.000 title claims description 6
- 239000002777 nucleoside Substances 0.000 title 1
- NYPIRLYMDJMKGW-VPCXQMTMSA-N 4-amino-1-[(2r,3r,4r,5r)-3-fluoro-4-hydroxy-5-(hydroxymethyl)-3-methyloxolan-2-yl]pyrimidin-2-one Chemical class C[C@@]1(F)[C@H](O)[C@@H](CO)O[C@H]1N1C(=O)N=C(N)C=C1 NYPIRLYMDJMKGW-VPCXQMTMSA-N 0.000 claims abstract description 24
- 125000004178 (C1-C4) alkyl group Chemical group 0.000 claims abstract description 20
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 claims description 51
- YMWUJEATGCHHMB-UHFFFAOYSA-N Dichloromethane Chemical compound ClCCl YMWUJEATGCHHMB-UHFFFAOYSA-N 0.000 claims description 42
- 239000000203 mixture Substances 0.000 claims description 32
- IMNFDUFMRHMDMM-UHFFFAOYSA-N N-Heptane Chemical compound CCCCCCC IMNFDUFMRHMDMM-UHFFFAOYSA-N 0.000 claims description 30
- QTBSBXVTEAMEQO-UHFFFAOYSA-N Acetic acid Chemical compound CC(O)=O QTBSBXVTEAMEQO-UHFFFAOYSA-N 0.000 claims description 27
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 claims description 23
- XBDUZBHKKUFFRH-UHFFFAOYSA-N n-(2-oxo-1h-pyrimidin-6-yl)benzamide Chemical compound OC1=NC=CC(NC(=O)C=2C=CC=CC=2)=N1 XBDUZBHKKUFFRH-UHFFFAOYSA-N 0.000 claims description 18
- 239000002904 solvent Substances 0.000 claims description 18
- 125000001997 phenyl group Chemical group [H]C1=C([H])C([H])=C(*)C([H])=C1[H] 0.000 claims description 15
- WYURNTSHIVDZCO-UHFFFAOYSA-N Tetrahydrofuran Chemical group C1CCOC1 WYURNTSHIVDZCO-UHFFFAOYSA-N 0.000 claims description 14
- 238000006243 chemical reaction Methods 0.000 claims description 13
- FHQBHYHWKPVUEZ-WBMRYOJMSA-N C[C@@]1(F)[C@H](O)[C@@H](CO)O[C@H]1n1ccc(NC(=O)c2ccccc2)nc1=O Chemical class C[C@@]1(F)[C@H](O)[C@@H](CO)O[C@H]1n1ccc(NC(=O)c2ccccc2)nc1=O FHQBHYHWKPVUEZ-WBMRYOJMSA-N 0.000 claims description 11
- ADRYMGZERSERRO-DUVQVXGLSA-N (2R,3R,4R)-5-chloro-4-fluoro-2-(hydroxymethyl)-4-methyloxolan-3-ol Chemical compound C[C@@]1(F)[C@H](O)[C@@H](CO)OC1Cl ADRYMGZERSERRO-DUVQVXGLSA-N 0.000 claims description 10
- WQDUMFSSJAZKTM-UHFFFAOYSA-N Sodium methoxide Chemical group [Na+].[O-]C WQDUMFSSJAZKTM-UHFFFAOYSA-N 0.000 claims description 10
- 238000005859 coupling reaction Methods 0.000 claims description 10
- 239000011541 reaction mixture Substances 0.000 claims description 9
- 238000006136 alcoholysis reaction Methods 0.000 claims description 8
- 230000008878 coupling Effects 0.000 claims description 8
- 238000010168 coupling process Methods 0.000 claims description 8
- DKPFZGUDAPQIHT-UHFFFAOYSA-N butyl acetate Chemical compound CCCCOC(C)=O DKPFZGUDAPQIHT-UHFFFAOYSA-N 0.000 claims description 7
- 238000002425 crystallisation Methods 0.000 claims description 7
- 230000008025 crystallization Effects 0.000 claims description 7
- FFUAGWLWBBFQJT-UHFFFAOYSA-N hexamethyldisilazane Chemical compound C[Si](C)(C)N[Si](C)(C)C FFUAGWLWBBFQJT-UHFFFAOYSA-N 0.000 claims description 7
- JMMWKPVZQRWMSS-UHFFFAOYSA-N isopropyl acetate Chemical group CC(C)OC(C)=O JMMWKPVZQRWMSS-UHFFFAOYSA-N 0.000 claims description 7
- YLQBMQCUIZJEEH-UHFFFAOYSA-N tetrahydrofuran Natural products C=1C=COC=1 YLQBMQCUIZJEEH-UHFFFAOYSA-N 0.000 claims description 7
- 239000002841 Lewis acid Substances 0.000 claims description 6
- 125000003236 benzoyl group Chemical group [H]C1=C([H])C([H])=C(C([H])=C1[H])C(*)=O 0.000 claims description 6
- 239000012320 chlorinating reagent Substances 0.000 claims description 6
- 238000000605 extraction Methods 0.000 claims description 6
- 150000007517 lewis acids Chemical class 0.000 claims description 6
- 239000003960 organic solvent Substances 0.000 claims description 6
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 claims description 5
- 125000001449 isopropyl group Chemical group [H]C([H])([H])C([H])(*)C([H])([H])[H] 0.000 claims description 5
- YBBRCQOCSYXUOC-UHFFFAOYSA-N sulfuryl dichloride Chemical group ClS(Cl)(=O)=O YBBRCQOCSYXUOC-UHFFFAOYSA-N 0.000 claims description 5
- DGMOBVGABMBZSB-UHFFFAOYSA-N 2-methylpropanoyl chloride Chemical group CC(C)C(Cl)=O DGMOBVGABMBZSB-UHFFFAOYSA-N 0.000 claims description 4
- ATJFFYVFTNAWJD-UHFFFAOYSA-N Tin Chemical compound [Sn] ATJFFYVFTNAWJD-UHFFFAOYSA-N 0.000 claims description 4
- 239000003638 chemical reducing agent Substances 0.000 claims description 4
- XHXFXVLFKHQFAL-UHFFFAOYSA-N phosphoryl trichloride Chemical compound ClP(Cl)(Cl)=O XHXFXVLFKHQFAL-UHFFFAOYSA-N 0.000 claims description 4
- 230000009467 reduction Effects 0.000 claims description 4
- FYSNRJHAOHDILO-UHFFFAOYSA-N thionyl chloride Chemical compound ClS(Cl)=O FYSNRJHAOHDILO-UHFFFAOYSA-N 0.000 claims description 4
- 230000001131 transforming effect Effects 0.000 claims description 4
- 229910021627 Tin(IV) chloride Inorganic materials 0.000 claims description 3
- RHQDFWAXVIIEBN-UHFFFAOYSA-N Trifluoroethanol Chemical compound OCC(F)(F)F RHQDFWAXVIIEBN-UHFFFAOYSA-N 0.000 claims description 3
- BFNBIHQBYMNNAN-UHFFFAOYSA-N ammonium sulfate Chemical compound N.N.OS(O)(=O)=O BFNBIHQBYMNNAN-UHFFFAOYSA-N 0.000 claims description 3
- 229910052921 ammonium sulfate Inorganic materials 0.000 claims description 3
- 235000011130 ammonium sulphate Nutrition 0.000 claims description 3
- 239000003795 chemical substances by application Substances 0.000 claims description 3
- 238000005660 chlorination reaction Methods 0.000 claims description 3
- 238000006884 silylation reaction Methods 0.000 claims description 3
- JRMUNVKIHCOMHV-UHFFFAOYSA-M tetrabutylammonium bromide Chemical compound [Br-].CCCC[N+](CCCC)(CCCC)CCCC JRMUNVKIHCOMHV-UHFFFAOYSA-M 0.000 claims description 3
- HPGGPRDJHPYFRM-UHFFFAOYSA-J tin(iv) chloride Chemical compound Cl[Sn](Cl)(Cl)Cl HPGGPRDJHPYFRM-UHFFFAOYSA-J 0.000 claims description 3
- JEDZLBFUGJTJGQ-UHFFFAOYSA-N [Na].COCCO[AlH]OCCOC Chemical compound [Na].COCCO[AlH]OCCOC JEDZLBFUGJTJGQ-UHFFFAOYSA-N 0.000 claims description 2
- 230000010933 acylation Effects 0.000 claims description 2
- 238000005917 acylation reaction Methods 0.000 claims description 2
- 230000003197 catalytic effect Effects 0.000 claims description 2
- 239000012419 sodium bis(2-methoxyethoxy)aluminum hydride Substances 0.000 claims description 2
- 230000009466 transformation Effects 0.000 claims description 2
- 241000711549 Hepacivirus C Species 0.000 abstract description 4
- 101800001554 RNA-directed RNA polymerase Proteins 0.000 abstract description 2
- 239000003112 inhibitor Substances 0.000 abstract description 2
- 230000003389 potentiating effect Effects 0.000 abstract description 2
- 229940002612 prodrug Drugs 0.000 abstract description 2
- 239000000651 prodrug Substances 0.000 abstract description 2
- KFZMGEQAYNKOFK-UHFFFAOYSA-N Isopropanol Chemical compound CC(C)O KFZMGEQAYNKOFK-UHFFFAOYSA-N 0.000 description 22
- YXFVVABEGXRONW-UHFFFAOYSA-N Toluene Chemical compound CC1=CC=CC=C1 YXFVVABEGXRONW-UHFFFAOYSA-N 0.000 description 21
- 0 COOOOOOOOOOOOOOOOOOOOO*C[C@H]1O[C@@H](N2C=CC(N)=NC2=O)[C@](C)(F)[C@@H]1*OOOOOOOOOOOOOOOOOOOOOC Chemical compound COOOOOOOOOOOOOOOOOOOOO*C[C@H]1O[C@@H](N2C=CC(N)=NC2=O)[C@](C)(F)[C@@H]1*OOOOOOOOOOOOOOOOOOOOOC 0.000 description 19
- XEKOWRVHYACXOJ-UHFFFAOYSA-N Ethyl acetate Chemical compound CCOC(C)=O XEKOWRVHYACXOJ-UHFFFAOYSA-N 0.000 description 19
- 239000000243 solution Substances 0.000 description 17
- ZMANZCXQSJIPKH-UHFFFAOYSA-N Triethylamine Chemical compound CCN(CC)CC ZMANZCXQSJIPKH-UHFFFAOYSA-N 0.000 description 11
- 239000000725 suspension Substances 0.000 description 11
- 239000010410 layer Substances 0.000 description 8
- 239000012044 organic layer Substances 0.000 description 8
- VHYFNPMBLIVWCW-UHFFFAOYSA-N 4-Dimethylaminopyridine Chemical compound CN(C)C1=CC=NC=C1 VHYFNPMBLIVWCW-UHFFFAOYSA-N 0.000 description 6
- HEMHJVSKTPXQMS-UHFFFAOYSA-M Sodium hydroxide Chemical compound [OH-].[Na+] HEMHJVSKTPXQMS-UHFFFAOYSA-M 0.000 description 6
- 150000001875 compounds Chemical class 0.000 description 6
- 239000012455 biphasic mixture Substances 0.000 description 5
- BHQKMRHCDSPLRZ-UHFFFAOYSA-N C[Si](C)(C)OC1=NC=CC(NC(=O)C2=CC=CC=C2)=N1.O=C1N=C(NC(=O)C2=CC=CC=C2)C=CN1 Chemical compound C[Si](C)(C)OC1=NC=CC(NC(=O)C2=CC=CC=C2)=N1.O=C1N=C(NC(=O)C2=CC=CC=C2)C=CN1 BHQKMRHCDSPLRZ-UHFFFAOYSA-N 0.000 description 4
- QAOWNCQODCNURD-UHFFFAOYSA-N Sulfuric acid Chemical compound OS(O)(=O)=O QAOWNCQODCNURD-UHFFFAOYSA-N 0.000 description 4
- 238000003556 assay Methods 0.000 description 4
- 239000013078 crystal Substances 0.000 description 4
- 238000004128 high performance liquid chromatography Methods 0.000 description 4
- 229940011051 isopropyl acetate Drugs 0.000 description 4
- GWYFCOCPABKNJV-UHFFFAOYSA-N isovaleric acid Chemical compound CC(C)CC(O)=O GWYFCOCPABKNJV-UHFFFAOYSA-N 0.000 description 4
- 229960000549 4-dimethylaminophenol Drugs 0.000 description 3
- VEXZGXHMUGYJMC-UHFFFAOYSA-N Hydrochloric acid Chemical compound Cl VEXZGXHMUGYJMC-UHFFFAOYSA-N 0.000 description 3
- 239000000706 filtrate Substances 0.000 description 3
- FUZZWVXGSFPDMH-UHFFFAOYSA-N hexanoic acid Chemical compound CCCCCC(O)=O FUZZWVXGSFPDMH-UHFFFAOYSA-N 0.000 description 3
- 125000004108 n-butyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])([H])* 0.000 description 3
- 238000010992 reflux Methods 0.000 description 3
- 229920006395 saturated elastomer Polymers 0.000 description 3
- UIIMBOGNXHQVGW-UHFFFAOYSA-M Sodium bicarbonate Chemical compound [Na+].OC([O-])=O UIIMBOGNXHQVGW-UHFFFAOYSA-M 0.000 description 2
- MXEQSUUFNWPUJH-RDWHIKKYSA-N [(2r,3r,4r,5r)-5-(4-benzamido-2-oxopyrimidin-1-yl)-3-benzoyloxy-4-fluoro-4-methyloxolan-2-yl]methyl benzoate Chemical compound O([C@H]1[C@]([C@@H](O[C@@H]1COC(=O)C=1C=CC=CC=1)N1C(N=C(NC(=O)C=2C=CC=CC=2)C=C1)=O)(F)C)C(=O)C1=CC=CC=C1 MXEQSUUFNWPUJH-RDWHIKKYSA-N 0.000 description 2
- 239000002585 base Substances 0.000 description 2
- 230000015572 biosynthetic process Effects 0.000 description 2
- 125000004432 carbon atom Chemical group C* 0.000 description 2
- MVPPADPHJFYWMZ-UHFFFAOYSA-N chlorobenzene Chemical compound ClC1=CC=CC=C1 MVPPADPHJFYWMZ-UHFFFAOYSA-N 0.000 description 2
- 238000004821 distillation Methods 0.000 description 2
- 150000002430 hydrocarbons Chemical group 0.000 description 2
- KQNPFQTWMSNSAP-UHFFFAOYSA-N isobutyric acid Chemical compound CC(C)C(O)=O KQNPFQTWMSNSAP-UHFFFAOYSA-N 0.000 description 2
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 description 2
- 125000004123 n-propyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])* 0.000 description 2
- 125000002914 sec-butyl group Chemical group [H]C([H])([H])C([H])([H])C([H])(*)C([H])([H])[H] 0.000 description 2
- NLJMYIDDQXHKNR-UHFFFAOYSA-K sodium citrate Chemical compound O.O.[Na+].[Na+].[Na+].[O-]C(=O)CC(O)(CC([O-])=O)C([O-])=O NLJMYIDDQXHKNR-UHFFFAOYSA-K 0.000 description 2
- 229960000999 sodium citrate dihydrate Drugs 0.000 description 2
- 238000003756 stirring Methods 0.000 description 2
- 238000003786 synthesis reaction Methods 0.000 description 2
- 125000000999 tert-butyl group Chemical group [H]C([H])([H])C(*)(C([H])([H])[H])C([H])([H])[H] 0.000 description 2
- KDDZAFCXDSJFCX-LCWWXBKZSA-N 4-[(2R,3R,4R,5R)-5-(4-amino-2-oxopyrimidin-1-yl)-3-(2-carboxypropyl)-4-fluoro-3-hydroxy-4-methyloxolan-2-yl]-4-hydroxy-2-methylbutanoic acid Chemical compound CC(CC([C@@H]1[C@@]([C@@]([C@@H](O1)N2C=CC(=NC2=O)N)(C)F)(CC(C)C(=O)O)O)O)C(=O)O KDDZAFCXDSJFCX-LCWWXBKZSA-N 0.000 description 1
- OPHYBNDNYRWVDD-RGEUKSKWSA-N CC(=O)OC[C@H]1O[C@@H](N2C=CC(N)=NC2=O)[C@](C)(F)[C@@H]1OC(C)=O.CC(C)C(=O)Cl.C[C@@]1(F)[C@H](O)[C@@H](CO)O[C@H]1N1C=CC(N)=NC1=O Chemical compound CC(=O)OC[C@H]1O[C@@H](N2C=CC(N)=NC2=O)[C@](C)(F)[C@@H]1OC(C)=O.CC(C)C(=O)Cl.C[C@@]1(F)[C@H](O)[C@@H](CO)O[C@H]1N1C=CC(N)=NC1=O OPHYBNDNYRWVDD-RGEUKSKWSA-N 0.000 description 1
- JLBJSOXRDHFPEH-SGPPGTBBSA-N CC[C@H]1OC(=O)[C@](C)(F)[C@@H]1C.CC[C@H]1OC(Cl)[C@](C)(F)[C@@H]1C Chemical compound CC[C@H]1OC(=O)[C@](C)(F)[C@@H]1C.CC[C@H]1OC(Cl)[C@](C)(F)[C@@H]1C JLBJSOXRDHFPEH-SGPPGTBBSA-N 0.000 description 1
- ZCGLDMNDSIJHTJ-ARPIEXJLSA-N CC[C@H]1OC(Cl)[C@](C)(F)[C@@H]1C.CC[C@H]1O[C@@H](N2C=CC(NC(=O)C3=CC=CC=C3)=NC2=O)[C@](C)(F)[C@@H]1C.C[Si](C)(C)OC1=NC=CC(NC(=O)C2=CC=CC=C2)=N1.O=C1N=C(NC(=O)C2=CC=CC=C2)C=CN1 Chemical compound CC[C@H]1OC(Cl)[C@](C)(F)[C@@H]1C.CC[C@H]1O[C@@H](N2C=CC(NC(=O)C3=CC=CC=C3)=NC2=O)[C@](C)(F)[C@@H]1C.C[Si](C)(C)OC1=NC=CC(NC(=O)C2=CC=CC=C2)=N1.O=C1N=C(NC(=O)C2=CC=CC=C2)C=CN1 ZCGLDMNDSIJHTJ-ARPIEXJLSA-N 0.000 description 1
- AOCUZIZZMVLVEO-XINBIWAPSA-N CC[C@H]1O[C@@H](N2C=CC(NC(=O)C3=CC=CC=C3)=NC2=O)[C@](C)(F)[C@@H]1C.C[C@@]1(F)[C@H](O)[C@@H](CO)O[C@H]1N1C=CC(N)=NC1=O Chemical compound CC[C@H]1O[C@@H](N2C=CC(NC(=O)C3=CC=CC=C3)=NC2=O)[C@](C)(F)[C@@H]1C.C[C@@]1(F)[C@H](O)[C@@H](CO)O[C@H]1N1C=CC(N)=NC1=O AOCUZIZZMVLVEO-XINBIWAPSA-N 0.000 description 1
- OUKYMZJNLWKCSO-JXXFODFXSA-N C[C@@]([C@@H]([C@@H](COC(c1ccccc1)=O)O1)OC(c2ccccc2)=O)(C1=O)F Chemical compound C[C@@]([C@@H]([C@@H](COC(c1ccccc1)=O)O1)OC(c2ccccc2)=O)(C1=O)F OUKYMZJNLWKCSO-JXXFODFXSA-N 0.000 description 1
- DCERHCFNWRGHLK-UHFFFAOYSA-N C[Si](C)C Chemical compound C[Si](C)C DCERHCFNWRGHLK-UHFFFAOYSA-N 0.000 description 1
- MLESJYFEMSJZLZ-MAAOGQSESA-N [(2r,3r,4r,5r)-5-(4-amino-2-oxopyrimidin-1-yl)-4-fluoro-4-methyl-3-(2-methylpropanoyloxy)oxolan-2-yl]methyl 2-methylpropanoate Chemical compound C[C@@]1(F)[C@H](OC(=O)C(C)C)[C@@H](COC(=O)C(C)C)O[C@H]1N1C(=O)N=C(N)C=C1 MLESJYFEMSJZLZ-MAAOGQSESA-N 0.000 description 1
- 229910052783 alkali metal Inorganic materials 0.000 description 1
- AZDRQVAHHNSJOQ-UHFFFAOYSA-N alumane Chemical compound [AlH3] AZDRQVAHHNSJOQ-UHFFFAOYSA-N 0.000 description 1
- 239000008346 aqueous phase Substances 0.000 description 1
- 239000007864 aqueous solution Substances 0.000 description 1
- 230000008901 benefit Effects 0.000 description 1
- 239000003153 chemical reaction reagent Substances 0.000 description 1
- 125000001495 ethyl group Chemical group [H]C([H])([H])C([H])([H])* 0.000 description 1
- 239000012065 filter cake Substances 0.000 description 1
- 238000001914 filtration Methods 0.000 description 1
- 238000002955 isolation Methods 0.000 description 1
- 238000004519 manufacturing process Methods 0.000 description 1
- 229950010383 mericitabine Drugs 0.000 description 1
- 238000010899 nucleation Methods 0.000 description 1
- 150000007530 organic bases Chemical class 0.000 description 1
- 239000012074 organic phase Substances 0.000 description 1
- 239000000047 product Substances 0.000 description 1
- 238000000746 purification Methods 0.000 description 1
- 238000010791 quenching Methods 0.000 description 1
- 238000013341 scale-up Methods 0.000 description 1
- 229910000030 sodium bicarbonate Inorganic materials 0.000 description 1
- 235000017557 sodium bicarbonate Nutrition 0.000 description 1
- 125000000026 trimethylsilyl group Chemical group [H]C([H])([H])[Si]([*])(C([H])([H])[H])C([H])([H])[H] 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
- C07H19/00—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof
- C07H19/02—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof sharing nitrogen
- C07H19/04—Heterocyclic radicals containing only nitrogen atoms as ring hetero atom
- C07H19/06—Pyrimidine radicals
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P31/00—Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
- A61P31/12—Antivirals
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
- C07H1/00—Processes for the preparation of sugar derivatives
Definitions
- the present invention relates to an improved process for the preparation of (2′R)-2′-deoxy-2′-fluoro-2′-methylcytidine derivatives of formula I
- R 1 is selected from C 1-4 -alkyl which have the potential to be useful as prodrugs for potent inhibitors of the Hepatitis C Virus (HCV) NS5B polymerase (PCT Int. Publ. WO 2007/065829).
- HCV Hepatitis C Virus
- the present invention provides a process for preparing a (2′R)-2′-deoxy-2′-fluoro-2′-methylcytidine derivative of formula I wherein R 1 is selected from C 1-4 -alkyl, comprising the steps
- C 1-4 -alkyl denotes an unbranched or branched chain, saturated, monovalent hydrocarbon residue containing 1 to 4 carbon atoms, particularly methyl, ethyl, n-propyl, i-propyl, n-butyl, sec-butyl or t-butyl.
- C 3-4 -alkyl denotes an unbranched or branched chain, saturated, monovalent hydrocarbon residue containing 3 to 4 carbon atoms, particularly n-propyl, i-propyl, n-butyl, sec-butyl or t-butyl, more particularly i-propyl or n-butyl.
- the transformation in step a) comprises a reduction in the presence of a reducing agent and a subsequent chlorination in the presence of chlorinating agent.
- the reducing agent bis-(2-methoxyethoxy) (2,2,2,-trifluoro ethoxy) aluminum hydride is typically preformed from sodium bis-(2-methoxyethoxy) aluminum hydride, which is commercially available under the trade name Red-Al (Vitride®, solution in toluene) and trifluoroethanol.
- the reduction usually takes place in an organic solvent such as in toluene at a reaction temperature of 0° C. to ⁇ 30° C.
- the chlorinating agent is as a rule selected from sulfuryl chloride, thionyl chloride or phosphorus oxychloride.
- sulfuryl chloride in the presence of catalytic amounts of tetrabutyl ammonium bromide is used.
- the addition of the chlorinating agent as a rule takes place at a temperature of ⁇ 20° C. to 0° C., thereafter the reaction temperature is maintained between 20° C. and 30° C.
- the (2R)-2-deoxy-2-fluoro-2-methyl-D-ribofuranosyl chloride of formula III can be separated from the reaction mixture applying techniques known to the skilled in the art.
- Coupling step b) is characterized by the steps
- the silylation can be performed with a suitable silylating agent such as with hexamethyldisilazane usually in the presence of ammonium sulfate.
- Suitable C 3-4 -alkylacetate solvents are i-propyl or n-butyl acetate.
- the reaction typically takes place at temperatures higher than 85° C., i.e. particularly at the reflux temperature of the solvent, for about 3 h to 8 h.
- the resulting solution of the silylated N-benzoyl cytosine of formula VIb can be concentrated and used directly in the subsequent reaction step b 2 ).
- step b 2 the former solvent is completely exchanged with dichloromethane.
- Common Lewis acids known in the art are suitable for the conversion in step b 2 ). Particularly good results have been achieved with tin tetrachloride.
- the reaction is usually performed at a reaction temperature of 70° C. to 90° C. and a pressure of 2 bar to 3 bar. More particularly the reaction temperature is 75° C. to 85° C. and at a pressure of 2.5 bar.
- reaction mixture after completion of the coupling reaction in step b 2 ), is quenched by adding it to a mixture of acetic acid and water of 97:3 (w/w) to 80:20 (w/w), more particularly of 95:5 (w/w) to 90:10 (w/w), at a temperature of 10° C. to 30° C., more particularly at a temperature of 15° C. to 25° C.
- the (2′R)—N-benzoyl-2′-deoxy-2′-fluoro-2′-methyl-cytidine derivative of formula IV, so obtained in step b 2 ) can be further purified by multiple extractions of the tin with a mixture of water and acetic acid and subsequent crystallization after partly replacing the dichloromethane by methanol.
- the ratio of water and acetic acid in the mixture expediently is 1 to 3:1 (v/v).
- the extractions are repeated until the tin content in the isolated product is reproducibly ⁇ 20 ppm. As a rule this target can be reached with 3 to 4 extraction cycles.
- the ratio of methanol and dichloromethane in the mixture for the crystallization is usually 2 to 5:1 (w/w).
- the alcoholysis in step c) is performed in the presence of a base and an alcohol as solvent.
- Suitable bases are organic bases like alkali metal alkoxides, particularly sodium methoxide. In a particular embodiment 0.03 eq. to 0.10 eq. sodium methoxide in methanol is used.
- the alcoholysis reaction is usually performed at a reaction temperature of 50° C. to 65° C.
- the (2′R)-2′-deoxy-2′-fluoro-2′-methyl-cytidine (V) can typically be separated from the reaction mixture by applying techniques known to the skilled in the art, for instance by crystallization from isopropanol/methanol.
- the acylation in step d) is as a rule performed with a C 1-4 -alkanoyl chloride in the presence of an organic solvent/water mixture at temperatures of ⁇ 5° C. and 5 C.
- isobutyryl chloride is the selected C 1-4 -alkanoyl chloride and tetrahydrofuran is the selected organic solvent.
- the isolation of the (2′R)-2′-deoxy-2′-fluoro-2′-methylcytidine derivative of formula I from the reaction mixture can follow methods known to the skilled in the art, for instance by an extraction of the neutralized reaction mixture with ethyl acetate and subsequent crystallization in a mixture of a C 1-4 -alcohol and n-heptane.
- Suitable C 1-14 -alcohols are methanol, ethanol and i-propanol.
- the crystallization is performed with a mixture of i-propanol and n-heptane of 3:7 (v/v).
- the abbreviations used include: dichloromethane (DCM), 4-N,N-dimethylaminopyridine (DMAP), hexamethyldisilazane (HMDS), ethanol (EtOH), ethyl acetate (AcOEt), methanol (MeOH), methyl (Me), ethyl (Et), isopropanol, phenyl (Ph), benzoyl (Bz), room temperature (rt or RT), triethylamine (TEA or Et 3 N), tetrahydrofuran (THF) and trimethylsilyl (TMS).
- DCM dichloromethane
- DMAP 4-N,N-dimethylaminopyridine
- HMDS hexamethyldisilazane
- EtOH ethanol
- AcOEt ethyl acetate
- MeOH methyl
- Et ethyl
- TMS trimethylsilyl
- reaction mixture was then quenched by adding it at 15 to 40° C. to a preformed solution of 180 g of sodium citrate dihydrate in 420 g of water.
- the first reactor and the transfer lines were rinsed with 60 g of butyl acetate.
- 38 g of sodium hydroxide (42% in water) was then added and the biphasic mixture was stirred for 1 hour at 30-35° C.
- the layers were allowed to settle for at least 30 minutes and the lower aqueous phase was removed.
- the organic layer was washed at 28-35° C. with first an aqueous solution of 60 g of sodium citrate dihydrate in 140 g of water, followed by 200 g of water.
- Step b Preparation of (2′R)—N-benzoyl-2′-deoxy-2′-fluoro-2′-methyl-cytidine-3′,5′-dibenzoate
- Methanol was distilled from the filtrate at atmospheric pressure and the distilled solvent was continuously replaced by isopropanol maintaining the volume in the reactor constant at ⁇ 300 mL. In total, 400 mL of isopropanol was added during the solvent exchange. The resulting suspension was cooled from 80 to ⁇ 2° C. within 5 hours and subsequently stirred at this temperature for 4 hours. The crystals were filtered off, washed with isopropanol and dried at 70° C./ ⁇ 10 mbar to afford 25.6 g (91% yield) of the title compound with an assay (HPLC) of 99.6% (w/w).
- Step d Preparation of (2′R)-2′-deoxy-2′-fluoro-2′-methylcytidine-3′,5′-diisobutyrate (Mericitabine)
- the aqueous layer was separated (and discarded) and the organic layer was washed first with a mixture of 56 g of saturated aqueous sodium bicarbonate solution and 38 g of water followed by 72 g of water.
- the organic layer was concentrated to a volume of ⁇ 50 mL under vacuum with a jacket temperature 50 to 70° C. 325 g of isopropanol were charged in portions while the solution was concentrated under vacuum. A total of 250 g of isopropanol was distilled from the vessel.
- the mixture was heated to 70-75° C. and 275 g of n-heptane were added at this temperature within 3 to 4 hours.
- the resulting suspension was then cooled to ⁇ 5 to 0° C. within 6 hours.
- ethyl acetate 150 g were added and the biphasic mixture stirred for 20 minutes at 0° C. The layers were allowed to separate for 20 minutes. The aqueous layer was separated (and discarded) and the organic layer was treated with 100 g of water and the pH of the mixture was adjusted to pH 10.5 to 11.0 with 28% aqueous sodium hydroxide while the temperature was maintained at 0° C. Ethyl acetate (110 g) was added and the biphasic mixture was allowed to warm to rt and stirred at this temperature for 2 hours. The layers were allowed to separate for 20 minutes. The aqueous layer was separated (and discarded).
- the organic layer was washed once with diluted aqueous sulfuric acid (110 g) and then with water (50 g). From the organic layer, ethyl acetate, THF, and water were completely removed by distillation and replaced by isopropanol.
- the resulting mixture (containing approx. 17% (w/w) of the title compound) was heated to 65-70° C. and 130 g of n-heptane were added at this temperature within 30 minutes. After seeding, the mixture was cooled to 55° C. within 3 to 5 hours and 170 g of n-heptane were added at this temperature within one hour. The resulting suspension was then cooled to 0° C. within 3 to 5 hours.
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Abstract
An improved process for the preparation of (2′R)-2′-deoxy-2′-fluoro-2′-methylcytidine derivatives of formula I
-
- wherein R1 is selected from C1-4-alkyl is described.
The (2′R)-2′-deoxy-2′-fluoro-2′-methylcytidine derivatives of formula I have the potential to be useful as prodrugs for potent inhibitors of the Hepatitis C Virus (HCV) NS5B polymerase.
Description
- This application claims the benefit of priority under 35 U.S.C. §119(a) to EP 12169760.1 filed May 29, 2012 the contents of which is herein incorporated by reference in its entirety.
- The present invention relates to an improved process for the preparation of (2′R)-2′-deoxy-2′-fluoro-2′-methylcytidine derivatives of formula I
- wherein R1 is selected from C1-4-alkyl which have the potential to be useful as prodrugs for potent inhibitors of the Hepatitis C Virus (HCV) NS5B polymerase (PCT Int. Publ. WO 2007/065829).
- The present invention provides a process for preparing a (2′R)-2′-deoxy-2′-fluoro-2′-methylcytidine derivative of formula I wherein R1 is selected from C1-4-alkyl, comprising the steps
- a) transforming a (2R)-2-deoxy-2-fluoro-2-methyl-D-ribonolactone derivative II wherein R2 is phenyl or C1-4-alkyl into a (2R)-2-deoxy-2-fluoro-2-methyl-D-ribofuranosyl chloride of formula III wherein R2 is phenyl or C1-4-alkyl;
- b1) treating N-benzoyl-cytosine (VIa) with a silylating agent to afford silylated N-benzoyl cytosine VIb; and,
- (b2) coupling VIb with the (2R)-2-deoxy-2-fluoro-2-methyl-D-ribofuranosyl chloride of formula III wherein R2 is phenyl or C1-4-alkyl and Bz is benzoyl in the presence of dichloromethane as solvent and a Lewis acid, to form a (2′R)—N-benzoyl-2′-deoxy-2′-fluoro-2′-methyl-cytidine derivative of formula IV wherein R2 is phenyl or C1-4-alkyl;
- c) alcoholysis of the (2′R)—N-benzoyl-2′-deoxy-2′-fluoro-2′-methyl-cytidine derivative IV to afford (2′R)-2′-deoxy-2′-fluoro-2′-methyl-cytidine (V); and,
- d) acylating (2′R)-2′-deoxy-2′-fluoro-2′-methyl-cytisdine (V) to form the (2′R)-2′-deoxy-2′-fluoro-2′-methylcytidine derivative of formula I.
- The preparation of the (2′R)-2′-deoxy-2′-fluoro-2′-methylcytidine derivatives of formula I can follow the known steps:
- a) transforming the (2R)-2-deoxy-2-fluoro-2-methyl-D-ribonolactone derivative of formula II wherein R2 is phenyl or C1-4-alkyl into the (2R)-2-deoxy-2-fluoro-2-methyl-D-ribofuranosyl chloride of formula III wherein R2 is phenyl or C1-4-alkyl;
- b) coupling the (2R)-2-deoxy-2-fluoro-2-methyl-D-ribofuranosyl chloride of formula III with N-benzoyl cytosine of formula VIa to form the (2′R)—N-benzoyl-2′-deoxy-2′-fluoro-2′-methyl-cytidine derivative of formula IV wherein R2 is as above and Bz is benzoyl;
- c) alcoholysis of (2′R)—N-benzoyl-2′-deoxy-2′-fluoro-2′-methyl-cytidine derivative of formula IV to afford the (2′R)-2′-deoxy-2′-fluoro-2′-methyl-cytidine of formula;
- and finally
- d) acylating the (2′R)-2′-deoxy-2′-fluoro-2′-methyl-cytidine of formula V to form the (2′R)-2′-deoxy-2′-fluoro-2′-methylcytidine derivative of formula I.
- It was found that the crucial step for a technical scale synthesis of the (2′R)-2′-deoxy-2′-fluoro-2′-methylcytidine derivatives of formula I is the coupling step b). According to PCT Int. Appl. WO 2008/045419 this step requires the use of substantial amounts of chlorobenzene as solvent. The corrosive nature of this solvent renders it undesirable for large scale processes. It was further observed that the quench produces exothermy and HCl release which are difficult to control. In addition the subsequent filtration of the precipitated excess of N-benzoyl cytosine wase very slow and accordingly resulted in a limiting factor regarding scale up capacity. The object of the present invention therefore was to improve synthesis step b) in such a manner that the process can be applied on technical scale.
- The object of the invention could be achieved with the process of the present invention which comprises the preparation of the (2′R)-2′-deoxy-2′-fluoro-2′-methylcytidine derivative of formula I wherein R1 is selected for C1-4-alkyl comprising the steps:
- a) transforming the (2R)-2-deoxy-2-fluoro-2-methyl-D-ribonolactone derivative of formula II wherein R2 is phenyl or C1-4-alkyl into the (2R)-2-deoxy-2-fluoro-2-methyl-D-ribofuranosyl chloride of formula III wherein R2 is phenyl or C1-4-alkyl;
- b1) silylating of N-benzoyl cytosine (VIa) to form the silylated N-benzoyl cytosine of formula VIb; in the presence of a C3-4-alkylacetate as solvent;
- b2) the coupling of the silylated N-benzoyl cytosine (VIb) with the (2R)-2-deoxy-2-fluoro-2-methyl-D-ribofuranosyl chloride of formula III wherein R2 is phenyl or C1-4-alkyl, in the presence of dichloromethane as solvent and a Lewis acid to form the (2′R)—N-benzoyl-2′-deoxy-2′-fluoro-2′-methyl-cytidine derivative of formula IV wherein R2 is as above and Bz is benzoyl.
- c) alcoholysis of the (2′R)—N-benzoyl-2′-deoxy-2′-fluoro-2′-methyl-cytidine derivative of formula IV to afford the (2′R)-2′-deoxy-2′-fluoro-2′-methyl-cytidine of formula V and;
- d) acylating the (2′R)-2′-deoxy-2′-fluoro-2′-methyl-cytidine of formula V to form the (2′R)-2′-deoxy-2′-fluoro-2′-methylcytidine derivative of formula I,
- The following definitions are set forth to illustrate and define the meaning and scope of the various terms used to describe the invention herein.
- The term “C1-4-alkyl” as used herein denotes an unbranched or branched chain, saturated, monovalent hydrocarbon residue containing 1 to 4 carbon atoms, particularly methyl, ethyl, n-propyl, i-propyl, n-butyl, sec-butyl or t-butyl.
- The term “C3-4-alkyl” as used herein denotes an unbranched or branched chain, saturated, monovalent hydrocarbon residue containing 3 to 4 carbon atoms, particularly n-propyl, i-propyl, n-butyl, sec-butyl or t-butyl, more particularly i-propyl or n-butyl.
- Step a)
- The transformation in step a) comprises a reduction in the presence of a reducing agent and a subsequent chlorination in the presence of chlorinating agent.
- The reducing agent bis-(2-methoxyethoxy) (2,2,2,-trifluoro ethoxy) aluminum hydride is typically preformed from sodium bis-(2-methoxyethoxy) aluminum hydride, which is commercially available under the trade name Red-Al (Vitride®, solution in toluene) and trifluoroethanol.
- The reduction usually takes place in an organic solvent such as in toluene at a reaction temperature of 0° C. to −30° C.
- After completion of the reduction the reaction mixture is subjected to the chlorination reaction. The chlorinating agent is as a rule selected from sulfuryl chloride, thionyl chloride or phosphorus oxychloride. Preferably sulfuryl chloride in the presence of catalytic amounts of tetrabutyl ammonium bromide is used. The addition of the chlorinating agent as a rule takes place at a temperature of −20° C. to 0° C., thereafter the reaction temperature is maintained between 20° C. and 30° C.
- The (2R)-2-deoxy-2-fluoro-2-methyl-D-ribofuranosyl chloride of formula III can be separated from the reaction mixture applying techniques known to the skilled in the art.
- Step b)
- Coupling step b) is characterized by the steps
- b1) the silylation of N-benzoyl cytosine (VIa) to form the silylated N-benzoyl cytosine of formula VIb in the presence of a C3-4-alkylacetate as solvent; and,
- b2) coupling (VIb) with the (2R)-2-deoxy-2-fluoro-2-methyl-D-ribofuranosyl chloride of formula III, wherein R2 is phenyl or C1-4-alkyl, to form the (2′R)—N-benzoyl-2′-deoxy-2′-fluoro-2′-methyl-cytidine derivative of formula IV, wherein R2 is as above and Bz is benzoyl, in the presence of dichloromethane as solvent and a Lewis acid.
- Step b1
- The silylation can be performed with a suitable silylating agent such as with hexamethyldisilazane usually in the presence of ammonium sulfate. Suitable C3-4-alkylacetate solvents are i-propyl or n-butyl acetate. The reaction typically takes place at temperatures higher than 85° C., i.e. particularly at the reflux temperature of the solvent, for about 3 h to 8 h. The resulting solution of the silylated N-benzoyl cytosine of formula VIb can be concentrated and used directly in the subsequent reaction step b2).
- Step b2
- For step b2) the former solvent is completely exchanged with dichloromethane. Common Lewis acids known in the art are suitable for the conversion in step b2). Particularly good results have been achieved with tin tetrachloride. The reaction is usually performed at a reaction temperature of 70° C. to 90° C. and a pressure of 2 bar to 3 bar. More particularly the reaction temperature is 75° C. to 85° C. and at a pressure of 2.5 bar.
- In a further particular embodiment the reaction mixture, after completion of the coupling reaction in step b2), is quenched by adding it to a mixture of acetic acid and water of 97:3 (w/w) to 80:20 (w/w), more particularly of 95:5 (w/w) to 90:10 (w/w), at a temperature of 10° C. to 30° C., more particularly at a temperature of 15° C. to 25° C.
- In a further particular embodiment the (2′R)—N-benzoyl-2′-deoxy-2′-fluoro-2′-methyl-cytidine derivative of formula IV, so obtained in step b2) can be further purified by multiple extractions of the tin with a mixture of water and acetic acid and subsequent crystallization after partly replacing the dichloromethane by methanol.
- The ratio of water and acetic acid in the mixture expediently is 1 to 3:1 (v/v). The extractions are repeated until the tin content in the isolated product is reproducibly <20 ppm. As a rule this target can be reached with 3 to 4 extraction cycles. The ratio of methanol and dichloromethane in the mixture for the crystallization is usually 2 to 5:1 (w/w).
- Step c)
- The alcoholysis in step c) is performed in the presence of a base and an alcohol as solvent. Suitable bases are organic bases like alkali metal alkoxides, particularly sodium methoxide. In a particular embodiment 0.03 eq. to 0.10 eq. sodium methoxide in methanol is used. The alcoholysis reaction is usually performed at a reaction temperature of 50° C. to 65° C.
- When the alcoholysis is completed, the (2′R)-2′-deoxy-2′-fluoro-2′-methyl-cytidine (V) can typically be separated from the reaction mixture by applying techniques known to the skilled in the art, for instance by crystallization from isopropanol/methanol.
- Step d)
- The acylation in step d) is as a rule performed with a C1-4-alkanoyl chloride in the presence of an organic solvent/water mixture at temperatures of −5° C. and 5 C. In a particular embodiment isobutyryl chloride is the selected C1-4-alkanoyl chloride and tetrahydrofuran is the selected organic solvent. The isolation of the (2′R)-2′-deoxy-2′-fluoro-2′-methylcytidine derivative of formula I from the reaction mixture can follow methods known to the skilled in the art, for instance by an extraction of the neutralized reaction mixture with ethyl acetate and subsequent crystallization in a mixture of a C1-4-alcohol and n-heptane. Suitable C1-14-alcohols are methanol, ethanol and i-propanol. In a particular embodiment the crystallization is performed with a mixture of i-propanol and n-heptane of 3:7 (v/v).
- The abbreviations used include: dichloromethane (DCM), 4-N,N-dimethylaminopyridine (DMAP), hexamethyldisilazane (HMDS), ethanol (EtOH), ethyl acetate (AcOEt), methanol (MeOH), methyl (Me), ethyl (Et), isopropanol, phenyl (Ph), benzoyl (Bz), room temperature (rt or RT), triethylamine (TEA or Et3N), tetrahydrofuran (THF) and trimethylsilyl (TMS).
-
- A solution of 132 g of trifluoroethanol in 110 g of toluene was slowly added at −30 to −10° C. to a solution of 381 g of Red-Al (Vitride®, 66.5% solution in toluene) in 90 g of toluene and the stirring the resulting mixture for 30 minutes. The mixture was then allowed to warm to room temperature where it can be stored for several weeks.
- 114.7 g of this modified Red-Al reagent was added within 2 to 3 hours to a suspension of 60 g of (2R)-2-deoxy-2-fluoro-2-methyl-D-ribonolactone-3,5-dibenzoate in 108 g of toluene and 78 g of butyl acetate while maintaining the temperature between −15 to −20° C. and the resulting mixture was stirred for 1 to 2 hours. When the reaction was complete, 0.6 g of tetrabutylammonium bromide was added. The solution was cooled to −20 to 0° C. then 75.0 g of sulfuryl chloride was added over 1 hour. After addition completion, the mixture was warmed to 17 to 20° C. and hold at this temperature for 4 to 5 hours. The reaction mixture was then quenched by adding it at 15 to 40° C. to a preformed solution of 180 g of sodium citrate dihydrate in 420 g of water. The first reactor and the transfer lines were rinsed with 60 g of butyl acetate. 38 g of sodium hydroxide (42% in water) was then added and the biphasic mixture was stirred for 1 hour at 30-35° C. The layers were allowed to settle for at least 30 minutes and the lower aqueous phase was removed. The organic layer was washed at 28-35° C. with first an aqueous solution of 60 g of sodium citrate dihydrate in 140 g of water, followed by 200 g of water. From the organic layer water, toluene and butyl acetate were distilled off at a maximum temperature of 50° C. and replaced by isopropyl acetate to afford 301.5 g of an isopropyl acetate solution containing 18.0% (w/w) of the title compound as an α/β-anomeric mixture (86% yield) which was used without further purification in the subsequent step b).
-
- To a suspension of N-benzoyl cytosine (30.2 g, 140.3 mmol) and ammonium sulfate (400 mg, 2.8 mmol) in isopropyl acetate (320 mL) was added at reflux temperature over 30 to 60 minutes hexamethyldisilazane (22.5 g, 139.4 mmol) and the resulting mixture was stirred at reflux temperature (88-90° C.) until a clear solution was obtained (approx. 5 hours). The solution was then concentrated under reduced pressure at approx. 40° C. to a residual volume of approx. 90 mL. then 200 g of (2R)-2-deoxy-2-fluoro-2-methyl-α/β-D-erythro-pentofuranosyl chloride-3,5-dibenzoate (18% (w/w) solution in isopropyl acetate; 91.3 mmol) was added and the resulting mixture concentrated under reduced pressure at approx. 40° C. to a residual volume of approx. 90 mL. The residue was treated with 200 mL of n-heptane and the solvents were completely removed at approximately 40° C. to yield a viscous oil. The oil was diluted with 340 mL of dichloromethane and the resulting turbid solution was treated at >30° C. with tin tetrachloride (46.4 g, 178.1 mmol). The reactor was closed and the resulting mixture heated to 75-80° C. (−2.5 bars). The mixture was stirred at this temperature for 20 hours and subsequently cooled to room temperature. The reaction mixture was then added over 1 to 2 hours at 18 to 25° C. to a preformed mixture of 72 g of acetic acid and 5.4 g water and the obtained grey suspension was subsequently stirred at 22° C. for an additional hour. The suspension was filtered and the transfer lines and the filter cake were washed in portions with 160 mL of dichloromethane. To the filtrate water (170 mL) and acetic acid (170 mL) were added and the biphasic mixture was stirred for 20 minutes at 30° C. The layers were then allowed to separate for 30 minutes. The lower organic phase was separated and subsequently washed three times with a mixture of water (150 mL) and acetic acid (50 mL). The organic layer was then polish filtered (using a ZetaCarbon™ filter cartridge). The filtrate was diluted with 300 mL of methanol and from the resulting mixture dichloromethane/methanol was distilled off at atmospheric pressure and the removed solvent was continuously replaced by methanol keeping the volume in the reactor constant at 850-900 mL. The distillation was stopped when the batch temperature was 52° C. The resulting suspension was cooled to 20° C. within 3 hours and stirred at this temperature for 2 hours. The crystals were filtered off, washed with methanol (200 mL) and dried at 55° C./<10 mbar to afford 34.9 g (67% yield) of the title compound with an assay (HPLC) of 99.8% (w/w) and a tin content of 9 ppm.
-
- To a suspension of (2′R)—N-benzoyl-2′-deoxy-2′-fluoro-2′-methyl-cytidine-3′,5′-dibenzoate (62.1 g, 108.6 mmol) in methanol (420 mL) at 60° C. was added sodium methoxide (25% (w/w) in methanol, 1.17 g, 5.4 mmol, 0.05 eq) and the resulting suspension was stirred at 60° C. for 4 hours. Isobutyric acid (0.58 g, 6.5 mmol, 0.06 eq) was then added and the resulting mixture was polish filtered. Methanol was distilled from the filtrate at atmospheric pressure and the distilled solvent was continuously replaced by isopropanol maintaining the volume in the reactor constant at −300 mL. In total, 400 mL of isopropanol was added during the solvent exchange. The resulting suspension was cooled from 80 to −2° C. within 5 hours and subsequently stirred at this temperature for 4 hours. The crystals were filtered off, washed with isopropanol and dried at 70° C./<10 mbar to afford 25.6 g (91% yield) of the title compound with an assay (HPLC) of 99.6% (w/w).
-
- In a jacketed vessel 20.0 g of (2′R)-2′-deoxy-2′-fluoro-2′-methylcytidine, 1.08 g of DMAP, and 54.4 g of TEA were suspended in 82.4 g of water and 184 g of THF, the mixture was cooled to 0±5° C. and 40 g of isobutyryl chloride were added within 1 to 2 hours while maintaining the temperature at 0±5° C. When the addition was complete, the solution was warmed to room temperature and the pH was adjusted to pH 6.0 to 7.0 with conc. hydrochloric acid. 120 g of ethyl acetate were then added and the biphasic mixture stirred for 20 minutes. The layers were allowed to separate for 20 minutes. The aqueous layer was separated (and discarded) and the organic layer was washed first with a mixture of 56 g of saturated aqueous sodium bicarbonate solution and 38 g of water followed by 72 g of water. The organic layer was concentrated to a volume of <50 mL under vacuum with a jacket temperature 50 to 70° C. 325 g of isopropanol were charged in portions while the solution was concentrated under vacuum. A total of 250 g of isopropanol was distilled from the vessel. The mixture was heated to 70-75° C. and 275 g of n-heptane were added at this temperature within 3 to 4 hours. The resulting suspension was then cooled to −5 to 0° C. within 6 hours. After 2 hours stirring at this temperature, the crystals were filtered off, washed with a mixture of 10 g isopropanol and 30 g of n-heptane and dried at 50±+5° C./<10 mbar to afford 26.7 g (86% yield) of the title compound with an assay (HPLC) of 99.3% (w/w).
- In a 1000 mL double jacket reactor 40.0 g of (2′R)-2′-deoxy-2′-fluoro-2′-methylcytidine, 0.12 g of DMAP, and 98 g of TEA were added at 40° C. to a mixture of 160 g of water and 350 g of THF. The resulting solution was cooled to 0±+5° C. and 68 g of isobutyryl chloride were added within 4 to 5 hours while maintaining the temperature at 0±+5° C. When the addition was complete, the solution was stirred for one additional hour at 0° C. The pH was then adjusted to pH 6.0 to 7.0 with 20% aqueous sulfuric acid while maintaining the reaction temperature at 0° C. 150 g of ethyl acetate were added and the biphasic mixture stirred for 20 minutes at 0° C. The layers were allowed to separate for 20 minutes. The aqueous layer was separated (and discarded) and the organic layer was treated with 100 g of water and the pH of the mixture was adjusted to pH 10.5 to 11.0 with 28% aqueous sodium hydroxide while the temperature was maintained at 0° C. Ethyl acetate (110 g) was added and the biphasic mixture was allowed to warm to rt and stirred at this temperature for 2 hours. The layers were allowed to separate for 20 minutes. The aqueous layer was separated (and discarded). The organic layer was washed once with diluted aqueous sulfuric acid (110 g) and then with water (50 g). From the organic layer, ethyl acetate, THF, and water were completely removed by distillation and replaced by isopropanol. The resulting mixture (containing approx. 17% (w/w) of the title compound) was heated to 65-70° C. and 130 g of n-heptane were added at this temperature within 30 minutes. After seeding, the mixture was cooled to 55° C. within 3 to 5 hours and 170 g of n-heptane were added at this temperature within one hour. The resulting suspension was then cooled to 0° C. within 3 to 5 hours. At this temperature additional 600 g of n-heptane were added within one hour and the suspension stirred for 2 hours. The crystals were filtered off, washed with 150 g of n-heptane and dried at 50±+5° C./<10 mbar to afford 55.2 g (90% yield) of the title compound with an assay (HPLC) of 99.4% (w/w).
Claims (20)
1. A process for the preparation of a (2′R)-2′-deoxy-2′-fluoro-2′-methylcytidine derivative of formula I wherein R1 is selected from C1-4-alkyl, comprising the steps
a) transforming a (2R)-2-deoxy-2-fluoro-2-methyl-D-ribonolactone derivative (II) wherein R2 is phenyl or C1-4-alkyl into a (2R)-2-deoxy-2-fluoro-2-methyl-D-ribofuranosyl chloride of formula III wherein R2 is phenyl or C1-4-alkyl;
b1) treating N-benzoyl-cytosine (VIa) with a silylating agent to afford silylated N-benzoyl cytosine (VIb); and,
(b2) the coupling VIb with the (2R)-2-deoxy-2-fluoro-2-methyl-D-ribofuranosyl chloride of formula III wherein R2 is phenyl or C1-4-alkyl and Bz is benzoyl, in the presence of dichloromethane as solvent and a Lewis acid, to form a (2′R)—N-benzoyl-2′-deoxy-2′-fluoro-2′-methyl-cytidine derivative of formula IV wherein R2 is phenyl or C1-4-alkyl;
c) alcoholysis of the (2′R)—N-benzoyl-2′-deoxy-2′-fluoro-2′-methyl-cytidine derivative (IV) to afford (2′R)-2′-deoxy-2′-fluoro-2′-methyl-cytidine (V); and,
2. The process according to claim 1 wherein R2 is phenyl.
3. The process according to claim 1 wherein R1 is i-propyl.
4. The process according to claim 1 wherein that i-propyl- or n-butyl acetate is used as solvent for step b1).
5. The process according to claim 4 wherein the silylation in step b1) is performed with hexamethyldisilazane in the presence of ammonium sulfate.
6. The process according to claim 1 wherein the Lewis acid used in step b2) is tin tetrachloride.
7. The process according to claim 6 wherein the coupling in step b2) is performed at a reaction temperature of 70° C. to 90° C. and a pressure of 2 bar to 3 bar.
8. The process according to claim 7 wherein the reaction mixture, after completion of the coupling reaction in step b2), is quenched with a mixture of acetic acid and water of 97:3 (w/w) to 80:20 (w/w) at a temperature of 10° C. to 30° C.
9. The process according to claim 8 wherein the (2′R)—N-benzoyl-2′-deoxy-2′-fluoro-2′-methyl-cytidine derivative of formula IV obtained in step b2) is further purified by multiple extractions of the tin with a mixture of water and acetic acid and subsequent crystallization by replacing partly of the dichloromethane by methanol.
10. The process according to claim 9 wherein the ratio of water and acetic acid for the extraction is 1 to 3:1 (v/v) and the ratio of methanol and dichloromethane for the crystallization is 2 to 5:1 (w/w).
11. The process according to claim 1 wherein the transformation in step a) comprises a reduction in the presence of a reducing agent and a subsequent chlorination in the presence of chlorinating agent.
12. The process according to claim 11 wherein the reducing agent is preformed from sodium bis-(2-methoxyethoxy) aluminum hydride und trifluoroethanol.
13. The process according to claim 11 wherein the chlorinating agent is selected from sulfuryl chloride, thionyl chloride or phosphorus oxychloride.
14. The process according to claim 13 wherein the chlorinating agent is sulfuryl chloride in the presence of catalytic amounts of tetrabutylammonium bromide.
15. The process according to claim 1 wherein the alcoholysis in step c) is performed in the presence of a base and an alcohol as solvent.
16. The process according to claim 15 wherein the base is sodium methoxide and the organic solvent is methanol.
17. The process according to claim 16 wherein 0.03-0.10 equiv. of sodium methoxide is used at a reaction temperature of 50° C. to 65° C.
18. The process according to claim 1 wherein the acylation in step d) is performed with a C1-4-alkanoyl chloride in the presence of an organic solvent/water mixture at temperatures of −5° C. and 5° C.
19. The process according to claim 18 wherein the C1-4-alkanoylchloride is isobutyryl chloride and the organic solvent is tetrahydrofuran.
20. The process according to claim 18 wherein the (2′R)-2′-deoxy-2′-fluoro-2′-methylcytidine derivative of formula I obtained from step d) is crystallized in a mixture of a C1-4-alcohol and n-heptane.
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EP12169760 | 2012-05-29 | ||
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US (1) | US20130324709A1 (en) |
EP (1) | EP2855497B1 (en) |
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CN (1) | CN104379591A (en) |
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IL (1) | IL234673A0 (en) |
MX (1) | MX2014014087A (en) |
NZ (1) | NZ631182A (en) |
PT (1) | PT2855497T (en) |
RU (1) | RU2014149148A (en) |
SG (1) | SG11201406945QA (en) |
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Cited By (3)
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CN107629099A (en) * | 2017-07-26 | 2018-01-26 | 杭州科本药业有限公司 | A kind of preparation technology of Suo Feibuwei intermediates |
USD842332S1 (en) | 2011-06-28 | 2019-03-05 | Google Llc | Display screen or portion thereof with an animated graphical user interface of a programmed computer system |
WO2024030429A1 (en) * | 2022-08-01 | 2024-02-08 | The United States Government, As Represented By The Secretary Of The Army | Base-modified ribonucleosides as prodrugs against viral and bacterial infections |
Families Citing this family (9)
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CN104817599B (en) * | 2015-03-20 | 2018-02-27 | 南京欧信医药技术有限公司 | A kind of synthetic method of 5 hydroxyl tetrahydrofuran derivative |
CN105017183B (en) * | 2015-07-16 | 2018-06-12 | 江苏福瑞生物医药有限公司 | A kind of method for crystallising of pharmaceutical intermediate |
CN105061535A (en) * | 2015-09-02 | 2015-11-18 | 江苏科本医药化学有限公司 | Synthetic method of sofosbuvir intermediate |
CN107805266A (en) * | 2016-09-09 | 2018-03-16 | 上海度德医药科技有限公司 | Preparation method as the methyl deoxyribonucleoside of 2 fluorine 2 of Suo Feibuwei intermediates |
CN109422781B (en) * | 2017-08-25 | 2022-01-18 | 江苏瑞科医药科技有限公司 | Preparation method of (2R) -2-deoxy-2-fluoro-2-methyl-D-ribofuranosyl chloride |
CN109422789A (en) * | 2017-08-28 | 2019-03-05 | 常州制药厂有限公司 | A kind of preparation process amelioration method of Suo Feibuwei |
CN109438537A (en) * | 2018-11-20 | 2019-03-08 | 江苏科本药业有限公司 | A kind of preparation method of Suo Feibuwei key intermediate |
CN111269282A (en) * | 2020-03-20 | 2020-06-12 | 江苏阿尔法药业有限公司 | Method for preparing sofosbuvir intermediate by using continuous flow microchannel reactor |
CN115894576A (en) * | 2022-11-24 | 2023-04-04 | 江苏阿尔法药业股份有限公司 | A kind of synthetic technique of sofosbuvir key intermediate |
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KR101177590B1 (en) * | 2004-09-14 | 2012-08-27 | 파마셋 인코포레이티드 | Preparation of 2'-fluoro-2'-alkyl-substituted or other optionally substituted ribofuranosyl pyrimidines and purines and their derivatives |
MY150667A (en) * | 2005-12-09 | 2014-02-28 | Gilead Pharmasset Llc | Antiviral nucleosides |
PL2084174T3 (en) * | 2006-10-10 | 2013-12-31 | Gilead Pharmasset Llc | Preparation of nucleosides ribofuranosyl pyrimidines |
CN101024667B (en) * | 2007-03-30 | 2011-01-26 | 湖北益泰药业有限公司 | Method for preparing gemcitabine hydrochloride |
EP2048151A1 (en) * | 2007-10-10 | 2009-04-15 | Cilag AG | Method for producing nucleosides by direct glycosylation of the nucleoside base |
US8173621B2 (en) * | 2008-06-11 | 2012-05-08 | Gilead Pharmasset Llc | Nucleoside cyclicphosphates |
TW201026715A (en) * | 2008-12-23 | 2010-07-16 | Pharmasset Inc | Nucleoside phosphoramidates |
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- 2013-05-27 AU AU2013269799A patent/AU2013269799A1/en not_active Abandoned
- 2013-05-27 CA CA2872171A patent/CA2872171A1/en not_active Abandoned
- 2013-05-27 JP JP2015514444A patent/JP2015518017A/en active Pending
- 2013-05-27 PT PT137251591T patent/PT2855497T/en unknown
- 2013-05-27 EP EP13725159.1A patent/EP2855497B1/en not_active Not-in-force
- 2013-05-27 ES ES13725159.1T patent/ES2583375T3/en active Active
- 2013-05-27 KR KR1020147033378A patent/KR20150018524A/en not_active Withdrawn
- 2013-05-27 NZ NZ631182A patent/NZ631182A/en not_active IP Right Cessation
- 2013-05-27 AR ARP130101838 patent/AR091166A1/en unknown
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- 2013-05-27 BR BR112014028692A patent/BR112014028692A2/en not_active Application Discontinuation
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Cited By (3)
Publication number | Priority date | Publication date | Assignee | Title |
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USD842332S1 (en) | 2011-06-28 | 2019-03-05 | Google Llc | Display screen or portion thereof with an animated graphical user interface of a programmed computer system |
CN107629099A (en) * | 2017-07-26 | 2018-01-26 | 杭州科本药业有限公司 | A kind of preparation technology of Suo Feibuwei intermediates |
WO2024030429A1 (en) * | 2022-08-01 | 2024-02-08 | The United States Government, As Represented By The Secretary Of The Army | Base-modified ribonucleosides as prodrugs against viral and bacterial infections |
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AU2013269799A1 (en) | 2014-10-02 |
JP2015518017A (en) | 2015-06-25 |
ES2583375T3 (en) | 2016-09-20 |
IL234673A0 (en) | 2014-11-30 |
AR091166A1 (en) | 2015-01-14 |
RU2014149148A (en) | 2016-07-20 |
CA2872171A1 (en) | 2013-12-05 |
EP2855497B1 (en) | 2016-04-20 |
NZ631182A (en) | 2015-09-25 |
BR112014028692A2 (en) | 2017-06-27 |
KR20150018524A (en) | 2015-02-23 |
MX2014014087A (en) | 2015-01-26 |
EP2855497A1 (en) | 2015-04-08 |
WO2013178571A1 (en) | 2013-12-05 |
SG11201406945QA (en) | 2014-12-30 |
CN104379591A (en) | 2015-02-25 |
PT2855497T (en) | 2016-07-28 |
HK1207384A1 (en) | 2016-01-29 |
ZA201407529B (en) | 2015-12-23 |
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